Replace any damaged gears or gears with excessively worn dogs or dog holes.

Shift Fork Guide Pin/Drum Groove Wear InspectionClutch Plate, Wear, Damage Inspection
Visually inspect the friction and steel plates for signs of
seizure, overheating (discoloration), or uneven wear.
Measure the thickness of each friction plate [A] at several
points.
If any plates show signs of damage, or if they have worn
past the service limit, replace them with new on ...
Water Pump Housing Assembly
NOTICE
Do not reuse the mechanical seal and oil seal.
Apply high-temperature grease to the new oil seal lips [A].
Press the new oil seal into the housing with a bearing
driver [B] until it stops at the bottom surface [C] of the
housing.
Special Tool - Bearing Driver Set: 57001-1129
...
Subthrottle Valve Actuator Inspection
NOTE
Be sure the battery is fully charged.
Remove the air cleaner housing (see Air Cleaner Housing
Removal in the Fuel System (DFI) chapter).
Turn the ignition switch to ON.
Check to see that all the subthrottle valves [A] open and
close smoothly.
Turn the ignition switch to OFF.
I ...